Bio Restriction Fragment Analysis

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by gptomics · vlatest · Repository

Analyzes DNA sequence fragments to identify potential biological restrictions and predict gene function impacts.

Install on your platform

We auto-selected Claude Code based on this skill’s supported platforms.

1

Run in terminal (recommended)

terminal
claude mcp add bio-restriction-fragment-analysis npx -- -y @trustedskills/bio-restriction-fragment-analysis
2

Or manually add to ~/.claude/settings.json

~/.claude/settings.json
{
  "mcpServers": {
    "bio-restriction-fragment-analysis": {
      "command": "npx",
      "args": [
        "-y",
        "@trustedskills/bio-restriction-fragment-analysis"
      ]
    }
  }
}

Requires Claude Code (claude CLI). Run claude --version to verify your install.

About This Skill

What it does

This skill performs bio-restriction fragment analysis, a technique used in molecular biology. It can analyze DNA fragments based on restriction enzyme digestion patterns and predict the sizes of resulting fragments. The tool enables users to simulate digestions and interpret results for genetic research or diagnostics.

When to use it

  • Predicting fragment sizes after restriction enzyme digestion for gel electrophoresis experiments.
  • Analyzing potential insertion sites for recombinant DNA constructs.
  • Simulating restriction digests for educational purposes in molecular biology courses.
  • Troubleshooting unexpected band patterns in gel electrophoresis results.

Key capabilities

  • Restriction enzyme digestion simulation
  • Fragment size prediction
  • DNA sequence analysis
  • Gel electrophoresis interpretation

Example prompts

  • "Analyze this DNA sequence [sequence] with EcoRI and HindIII."
  • "What are the expected fragment sizes if I digest this plasmid [sequence] with BamHI?"
  • "Simulate a restriction digest of this genomic region [sequence] using all available enzymes."

Tips & gotchas

  • The accuracy of results depends on the quality and completeness of the input DNA sequence.
  • Ensure that the provided enzyme recognition sequences are correct for reliable digestion simulation.

Tags

🛡️

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Details

Version
vlatest
License
Author
gptomics
Installs
3

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Passed automated security scans.