Bio Restriction Sites

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by gptomics · vlatest · Repository

Identifies DNA restriction enzyme recognition sites within a sequence, crucial for cloning and genetic engineering applications.

Install on your platform

We auto-selected Claude Code based on this skill’s supported platforms.

1

Run in terminal (recommended)

terminal
claude mcp add bio-restriction-sites npx -- -y @trustedskills/bio-restriction-sites
2

Or manually add to ~/.claude/settings.json

~/.claude/settings.json
{
  "mcpServers": {
    "bio-restriction-sites": {
      "command": "npx",
      "args": [
        "-y",
        "@trustedskills/bio-restriction-sites"
      ]
    }
  }
}

Requires Claude Code (claude CLI). Run claude --version to verify your install.

About This Skill

What it does

This skill allows AI agents to identify and analyze restriction sites within DNA sequences. It can determine the location of specific restriction enzymes cutting sites, which is crucial for molecular biology workflows like cloning and genetic engineering. The skill provides information about potential enzyme recognition sequences and their positions.

When to use it

  • Analyzing a gene sequence to plan for PCR amplification or cloning.
  • Predicting fragment sizes after digestion with a particular restriction enzyme.
  • Designing primers flanking a specific restriction site for targeted mutagenesis.
  • Identifying potential restriction sites in a novel DNA sequence of unknown origin.

Key capabilities

  • Restriction site identification
  • Enzyme recognition sequence detection
  • Position reporting within a DNA sequence

Example prompts

  • "Find all EcoRI restriction sites in this DNA sequence: ATCGAT..."
  • "What is the location of the HindIII site in this gene?"
  • "List all possible restriction enzyme cutting sites present in this sequence."

Tips & gotchas

The accuracy of the skill depends on the quality and completeness of the provided DNA sequence. Ensure that the input sequence is free of errors for reliable results.

Tags

🛡️

TrustedSkills Verification

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Details

Version
vlatest
License
Author
gptomics
Installs
3

🌐 Community

Passed automated security scans.