Uniprot Database

🌐Community
by drshailesh88 · vlatest · Repository

Access and query Dr. Shailesh's curated UniProt protein data for detailed information on sequences, functions, and modifications.

Install on your platform

We auto-selected Claude Code based on this skill’s supported platforms.

1

Run in terminal (recommended)

terminal
claude mcp add drshailesh88-uniprot-database npx -- -y @trustedskills/drshailesh88-uniprot-database
2

Or manually add to ~/.claude/settings.json

~/.claude/settings.json
{
  "mcpServers": {
    "drshailesh88-uniprot-database": {
      "command": "npx",
      "args": [
        "-y",
        "@trustedskills/drshailesh88-uniprot-database"
      ]
    }
  }
}

Requires Claude Code (claude CLI). Run claude --version to verify your install.

About This Skill

What it does

This skill provides access to the UniProt database, a comprehensive resource for protein information. It allows retrieval of data such as protein sequences, functional annotations, taxonomic classifications, and cross-references to other databases. The skill can be used to query specific proteins or explore broader aspects of proteomics research.

When to use it

  • Researching a specific protein: Find detailed information about a particular protein’s function, structure, and interactions.
  • Analyzing gene expression data: Correlate gene expression levels with known protein properties from UniProt.
  • Identifying potential drug targets: Explore proteins involved in disease pathways using UniProt's annotations.
  • Validating experimental results: Cross-reference newly discovered proteins or sequences against the established UniProt database.

Key capabilities

  • Access to UniProt protein sequence data
  • Retrieval of functional annotations for proteins
  • Taxonomic classification information
  • Cross-references to other databases

Example prompts

  • "What is the function of the BRCA1 protein?"
  • "Find all proteins involved in the MAPK signaling pathway."
  • "Give me the sequence of human hemoglobin."

Tips & gotchas

The UniProt database is vast; be specific with your queries to narrow down results. Understanding basic bioinformatics terminology will improve the quality and relevance of the information retrieved.

Tags

🛡️

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Details

Version
vlatest
License
Author
drshailesh88
Installs
9

🌐 Community

Passed automated security scans.