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Clinpgx Database

Listed
jackspace·vlatest·database·MIT

Access and query clinical data from PGx databases via a structured interface powered by Jackspace's AI.

Repository

Install on your platform

Showing Claude Code. One command installs this skill into any of the agents below.

  1. 1

    Run this in your project

    terminal
    $ npx skills add jackspace/claudeskillz --skill clinpgx-database -a claude-code

  2. Uses the open-source skills CLI and needs Node.js. Add -g to install it for your user instead of this project.

What we know about this skill

Publisher

jackspace

Taken from the source listing. We haven't verified who controls this account.

Install target

Live repository

Not pinned. Installing fetches whatever the repository holds at the time you run the command.

No human has reviewed this code. The checks below are a static scan of the files at one commit — nobody has run this skill or judged whether it works. A skill runs with whatever access you give your agent, so read the source before you install it.

Automated safety checks

scanned

This skill failed 1 of 6 checks. A failure is not proof of bad intent; it means something in the code needs a human to look at it before you run it.

  • No undeclared network calls: failed

    Contacts 1 host that is neither well-known infrastructure nor declared in the skill's frontmatter: api.clinpgx.org.

    Every host the skill dials — from its scripts, its config endpoints or the commands it tells the agent to run — is either well-known package and API infrastructure or declared in its own frontmatter. Links in documentation are not counted.

    Hosts contacted

    api.clinpgx.orgundeclared

    What it found (3 of 32)

    • skills/scientific-db-clinpgx-database/SKILL.json:17contacts api.clinpgx.org
      "Installation and Setup": "### Python API Access\r\n\r\nThe ClinPGx REST API provides programmatic access to all database resources. Basic setup:\r\n\r\n```bas…
    • skills/scientific-db-clinpgx-database/SKILL.md:63contacts api.clinpgx.org
      response = requests.get("https://api.clinpgx.org/v1/gene/CYP2D6")
    • skills/scientific-db-clinpgx-database/SKILL.md:67contacts api.clinpgx.org
      response = requests.get("https://api.clinpgx.org/v1/gene",

  • Declares what it does: passed

    SKILL.md parses and declares a name and a description.

    SKILL.md exists, its frontmatter parses, and it declares a name and a description.

  • No obfuscated payloads: passed

    No encoded or obfuscated payloads.

    No base64, hex or compressed blob is decoded and then executed, and no encoded shell commands.

  • No credential access: passed

    Reads no keys, tokens, keychains or credential files.

    Neither the code nor the SKILL.md instructions read SSH keys, cloud credentials, keychains, token stores, browser cookie databases or dotfiles that hold secrets.

  • No pipe-to-shell installers: passed

    No pipe-to-shell or download-and-run installers.

    No `curl … | sh` pattern, in the code or in the instructions, that runs code fetched at run time.

  • Pinned to a commit: passed

    Scanned jackspace/claudeskillz at aef4e299d1.

    The exact upstream commit SHA that was scanned is recorded, so the result refers to specific bytes.

Commit
aef4e299d1
Manifest
skills/scientific-db-clinpgx-database/SKILL.md
Scanned
2 files, 589 lines
This is a static scan, not a review. It reads the skill's files; it does not run them, and it cannot tell you whether the skill is any good or whether the code does what its description says. A skill runs with whatever access you give your agent.
What each check looks for →

About this skill

What it does

This skill provides access to a clinical pharmacogenomics (PGx) database. It allows users to query genetic information related to drug response and metabolism, helping inform personalized medicine decisions. The database contains gene-drug interactions and associated clinical interpretations.

When to use it

  • Personalized Medication Recommendations: When needing to understand how a patient's genetics might affect their response to a specific medication.
  • Drug Interaction Analysis: To identify potential drug interactions based on a patient’s genetic profile.
  • Clinical Decision Support: As part of a broader clinical workflow for making informed prescribing decisions.
  • Pharmacogenomics Education: For learning about the relationship between genes and drug response.

Key capabilities

  • Gene-drug interaction data
  • Clinical interpretations of PGx results
  • Access to pharmacogenomic information

Example prompts

  • "What is the clinical interpretation for CYP2C19 and clopidogrel?"
  • "Tell me about the impact of genetic variations on warfarin metabolism."
  • "Show me gene-drug interactions related to codeine."

Tips & gotchas

The accuracy of recommendations depends on the completeness and currency of the underlying database. Always verify information with established clinical guidelines and consult with a qualified healthcare professional.