Gwas Database

🌐Community
by jimmc414 · vlatest · Repository

Access and query a GWAS database to identify genetic associations with traits specified in your request.

Install on your platform

We auto-selected Claude Code based on this skill’s supported platforms.

1

Run in terminal (recommended)

terminal
claude mcp add jimmc414-gwas-database npx -- -y @trustedskills/jimmc414-gwas-database
2

Or manually add to ~/.claude/settings.json

~/.claude/settings.json
{
  "mcpServers": {
    "jimmc414-gwas-database": {
      "command": "npx",
      "args": [
        "-y",
        "@trustedskills/jimmc414-gwas-database"
      ]
    }
  }
}

Requires Claude Code (claude CLI). Run claude --version to verify your install.

About This Skill

What it does

This skill provides access to a Genome Wide Association Study (GWAS) database. It allows users to query and retrieve data related to genetic variations and their associations with specific traits or diseases. The database contains information on SNPs, p-values, and effect sizes from published GWAS studies.

When to use it

  • Research: Quickly access GWAS data for a specific gene or trait to support scientific investigations.
  • Literature Review: Identify relevant GWAS studies related to a particular disease or phenotype.
  • Data Analysis Preparation: Obtain pre-computed statistical results from published GWAS analyses, reducing the need for manual recalculation.
  • Hypothesis Generation: Explore potential genetic risk factors associated with complex traits.

Key capabilities

  • SNP querying by ID (e.g., rsID)
  • Trait/disease association retrieval
  • P-value and effect size data access
  • GWAS study metadata lookup

Example prompts

  • "What is the p-value for SNP rs9295214 in relation to Alzheimer's disease?"
  • "Find GWAS studies associated with type 2 diabetes."
  • "Give me the effect size for a SNP linked to height."

Tips & gotchas

The database contains data from publicly available sources. Results should be interpreted within the context of the original study methodologies and limitations.

Tags

🛡️

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Details

Version
vlatest
License
Author
jimmc414
Installs
7

🌐 Community

Passed automated security scans.