Chembl Database
Helps with AI, database as part of working with databases and data persistence workflows.
Install on your platform
We auto-selected Claude Code based on this skill’s supported platforms.
Run in terminal (recommended)
claude mcp add k-dense-ai-chembl-database npx -- -y @trustedskills/k-dense-ai-chembl-database
Or manually add to ~/.claude/settings.json
{
"mcpServers": {
"k-dense-ai-chembl-database": {
"command": "npx",
"args": [
"-y",
"@trustedskills/k-dense-ai-chembl-database"
]
}
}
}Requires Claude Code (claude CLI). Run claude --version to verify your install.
About This Skill
What it does
This skill provides access to the ChEMBL database, a curated resource of bioactive molecules with drug-like properties. It allows you to query this database for information on chemical compounds, their biological activities, and associated targets. You can retrieve data such as compound names, molecular structures (SMILES strings), target proteins, and experimental assay results.
When to use it
- Drug Discovery Research: Identify potential drug candidates based on specific target proteins or desired activity profiles.
- Chemical Informatics Analysis: Analyze relationships between chemical compounds and their biological effects for research purposes.
- Data Validation: Verify the existence and properties of a compound within a known database.
- Literature Review Support: Quickly retrieve relevant data points related to compounds mentioned in scientific publications.
Key capabilities
- Access to ChEMBL database records
- Compound property retrieval (names, SMILES strings)
- Target protein identification
- Bioactivity assay results extraction
Example prompts
- "Find all compounds that inhibit the EGFR kinase."
- "What is the SMILES string for compound ZINC10098574?"
- "List all targets of compound NSC23641."
Tips & gotchas
The ChEMBL database is extensive, so be specific with your queries to avoid overwhelming results. Familiarity with chemical nomenclature and target protein names will improve query effectiveness.
Tags
TrustedSkills Verification
Unlike other registries that point to live repositories, TrustedSkills pins every skill to a verified commit hash. This protects you from malicious updates — what you install today is exactly what was reviewed and verified.
Security Audits
| Gen Agent Trust Hub | Pass |
| Socket | Pass |
| Snyk | Pass |
🌐 Community
Passed automated security scans.