Reactome Database
Helps with AI, database as part of building frontend UIs and user experiences workflows.
Install on your platform
We auto-selected Claude Code based on this skill’s supported platforms.
Run in terminal (recommended)
claude mcp add k-dense-ai-reactome-database npx -- -y @trustedskills/k-dense-ai-reactome-database
Or manually add to ~/.claude/settings.json
{
"mcpServers": {
"k-dense-ai-reactome-database": {
"command": "npx",
"args": [
"-y",
"@trustedskills/k-dense-ai-reactome-database"
]
}
}
}Requires Claude Code (claude CLI). Run claude --version to verify your install.
About This Skill
What it does
This skill provides access to and allows querying of the Reactome database, a curated resource of biological pathways. It enables users to retrieve pathway information based on gene or protein input. The skill facilitates exploration of complex biological processes and relationships between genes and pathways.
When to use it
- Researching specific biological pathways related to a disease.
- Identifying potential drug targets by examining pathways affected by certain genes.
- Understanding the role of a particular gene in a cellular process.
- Exploring connections between different proteins within a pathway.
Key capabilities
- Reactome database access
- Pathway information retrieval
- Gene/protein-based queries
Example prompts
- "Show me the Reactome pathways associated with the BRCA1 gene."
- "What are the biological processes involved in the MAPK signaling pathway?"
- “Retrieve all reactions involving protein kinase A.”
Tips & gotchas
The Reactome database is extensive, so be specific with your queries to narrow down results. Familiarity with basic molecular biology terminology will enhance understanding of the retrieved information.
Tags
TrustedSkills Verification
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Security Audits
| Gen Agent Trust Hub | Pass |
| Socket | Pass |
| Snyk | Pass |
🌐 Community
Passed automated security scans.