Uniprot Database

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by k-dense-ai · vlatest · Repository

Helps with AI, database as part of working with databases and data persistence workflows.

Install on your platform

We auto-selected Claude Code based on this skill’s supported platforms.

1

Run in terminal (recommended)

terminal
claude mcp add k-dense-ai-uniprot-database npx -- -y @trustedskills/k-dense-ai-uniprot-database
2

Or manually add to ~/.claude/settings.json

~/.claude/settings.json
{
  "mcpServers": {
    "k-dense-ai-uniprot-database": {
      "command": "npx",
      "args": [
        "-y",
        "@trustedskills/k-dense-ai-uniprot-database"
      ]
    }
  }
}

Requires Claude Code (claude CLI). Run claude --version to verify your install.

About This Skill

What it does

This skill provides access to the UniProt database, a comprehensive resource for protein information. It allows AI agents to retrieve detailed data about proteins, including their sequences, functions, and interactions. The agent can use this information to answer questions related to proteomics research or analyze biological datasets.

When to use it

  • Protein identification: Identify unknown proteins based on sequence similarity.
  • Functional annotation: Determine the function of a protein given its amino acid sequence.
  • Literature review: Quickly gather relevant information about specific proteins for scientific publications.
  • Drug target discovery: Identify potential drug targets by analyzing protein properties and interactions.

Key capabilities

  • Access to UniProtKB/Swiss-Prot and UniProtKB/TrEMBL databases.
  • Protein sequence retrieval.
  • Functional annotation data extraction.
  • Interaction information lookup.

Example prompts

  • "What is the function of protein P01013?"
  • "Give me the amino acid sequence for human hemoglobin."
  • "List all known interactions for BRCA1."

Tips & gotchas

The UniProt database is vast; be specific with your queries to get targeted results. Understanding basic protein terminology will improve prompt effectiveness.

Tags

🛡️

TrustedSkills Verification

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Details

Version
vlatest
License
Author
k-dense-ai
Installs
7

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Passed automated security scans.