Tooluniverse Adverse Event Detection

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by mims-harvard · vlatest · Repository

Detects potential adverse events from clinical notes using ToolUniverse, improving patient safety monitoring and rapid response identification.

Install on your platform

We auto-selected Claude Code based on this skill’s supported platforms.

1

Run in terminal (recommended)

terminal
claude mcp add tooluniverse-adverse-event-detection npx -- -y @trustedskills/tooluniverse-adverse-event-detection
2

Or manually add to ~/.claude/settings.json

~/.claude/settings.json
{
  "mcpServers": {
    "tooluniverse-adverse-event-detection": {
      "command": "npx",
      "args": [
        "-y",
        "@trustedskills/tooluniverse-adverse-event-detection"
      ]
    }
  }
}

Requires Claude Code (claude CLI). Run claude --version to verify your install.

About This Skill

What it does

This skill, Tooluniverse Adverse Event Detection, automatically identifies and analyzes potential adverse drug events from clinical data. It leverages a pipeline incorporating FAERS disproportionality analysis, FDA label mining, mechanism-based prediction, and literature evidence to generate a quantitative Safety Signal Score (0-100). The goal is to improve patient safety monitoring and enable rapid response identification by quantifying signals for regulatory and clinical decision-making.

When to use it

  • When investigating reports of unexpected adverse events associated with a drug.
  • To prioritize serious adverse events like deaths or hospitalizations for immediate analysis.
  • For assessing the potential risk of a new drug based on available data sources.
  • To determine if an observed adverse event is specific to a drug, common across a class, or potentially due to confounding factors.

Key capabilities

  • Adverse Event Signal Detection: Identifies adverse events reported more than expected using statistical thresholds (PRR >= 2.0, N >= 3, lower CI > 1.0).
  • Quantitative Scoring: Generates a Safety Signal Score (0-100) to quantify the severity and likelihood of an adverse event.
  • Multi-Source Data Integration: Combines data from FAERS, FDA labels, OpenTargets, DrugBank, and literature sources.
  • Mechanism of Action Analysis: Uses tools like OpenTargets_get_drug_mechanisms_of_action_by_chemblId and drugbank_get_targets_by_drug_name_or_drugbank_id to assess biological plausibility.
  • Evidence Grading: Assigns evidence grades (T1-T4) to support findings.

Example prompts

  • "Analyze the adverse event 'myocardial infarction' associated with drug X."
  • "What is the Safety Signal Score for 'liver failure' and drug Y?"
  • "Is the adverse event 'rash' biologically plausible given the mechanism of action of drug Z?"

Tips & gotchas

  • Always use English drug names when interacting with ToolUniverse tools.
  • The skill prioritizes serious adverse events (deaths, hospitalizations) for analysis.
  • Results are based on statistical thresholds and data from specific sources; consider these limitations when interpreting findings.

Tags

🛡️

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Details

Version
vlatest
License
Author
mims-harvard
Installs
87

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Passed automated security scans.