Tooluniverse Protein Structure Retrieval
This skill swiftly retrieves protein structures from various databases using ToolUniverse, aiding researchers in structural biology and drug discovery.
Install on your platform
We auto-selected Claude Code based on this skill’s supported platforms.
Run in terminal (recommended)
claude mcp add tooluniverse-protein-structure-retrieval npx -- -y @trustedskills/tooluniverse-protein-structure-retrieval
Or manually add to ~/.claude/settings.json
{
"mcpServers": {
"tooluniverse-protein-structure-retrieval": {
"command": "npx",
"args": [
"-y",
"@trustedskills/tooluniverse-protein-structure-retrieval"
]
}
}
}Requires Claude Code (claude CLI). Run claude --version to verify your install.
About This Skill
What it does
This skill enables AI agents to discover and retrieve specific protein structures from the ToolUniverse database. It provides direct access to structural data essential for biological research and computational analysis.
When to use it
- You need to locate the 3D coordinates of a specific protein by its identifier or name.
- Your workflow requires integrating structural biology data into an automated research pipeline.
- You are analyzing protein-ligand interactions and need precise structural parameters.
- You want to query the ToolUniverse repository for available protein models without manual browsing.
Key capabilities
- Searches the ToolUniverse database for protein entries.
- Retrieves detailed structural information for identified proteins.
- Facilitates direct data access for downstream AI agent tasks.
Example prompts
- "Find the 3D structure of human hemoglobin in the ToolUniverse database."
- "Retrieve structural details for Protein ID PDB_12345."
- "List all available protein structures related to enzyme catalysis in ToolUniverse."
Tips & gotchas
Ensure you have a valid identifier or accurate protein name, as retrieval depends on precise matching within the ToolUniverse catalog. This skill is specific to the ToolUniverse ecosystem and may not access external databases like PDB directly unless integrated.
Tags
TrustedSkills Verification
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Security Audits
| Gen Agent Trust Hub | Pass |
| Socket | Pass |
| Snyk | Pass |
🌐 Community
Passed automated security scans.